If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 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'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 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'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 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'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 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'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ), 'gf_id' => 'HOM05D000502', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000502' ), 'data_identifier' => 'HOM05D000502', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000502', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1063', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p20770' => 'bna', 'A03p50070' => 'bna', 'A05p05130' => 'bna', 'A07p31210' => 'bna', 'A07p36660' => 'bna', 'A09p17810' => 'bna', 'A09p40750' => 'bna', 'Aa31LG10G6080' => 'aar', 'Aa31LG1G26620' => 'aar', 'Aa31LG2G10280' => 'aar', 'Aa31LG2G12790' => 'aar', 'Aa31LG4G10730' => 'aar', 'Aa31LG7G7900' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.898' => 'aag', 'Actinidia02139' => 'ach', 'Actinidia04431' => 'ach', 'Actinidia04432' => 'ach', 'Actinidia04433' => 'ach', 'Actinidia04434' => 'ach', 'Actinidia14422' => 'ach', 'Actinidia14997' => 'ach', 'Actinidia33977' => 'ach', 'Actinidia37384' => 'ach', 'Actinidia37385' => 'ach', 'Ah.07g198660' => 'amhyb', 'Ah.12g053600' => 'amhyb', 'AL1G24960' => 'aly', 'AL1G37950' => 'aly', 'AL2G16780' => 'aly', 'AL2G29450' => 'aly', 'AL4G44130' => 'aly', 'AL6G25550' => 'aly', 'AL7G38110' => 'aly', 'Aqoxy1G04236' => 'aox', 'Aqoxy3G00885' => 'aox', 'Aqoxy3G00887' => 'aox', 'Aqoxy3G00889' => 'aox', 'Aqoxy3G00894' => 'aox', 'Aqoxy3G00895' => 'aox', 'Aqoxy3G03112' => 'aox', 'Aqoxy3G03113' => 'aox', 'Aqoxy3G03114' => 'aox', 'Aqoxy3G03115' => 'aox', 'Aqoxy5G01738' => 'aox', 'Aqoxy5G03858' => 'aox', 'arahy.Tifrunner.gnm1.ann1.092XVY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0DDN1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1P3A5Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4M9DN5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BCTU9X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D4GSYH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K9BX1W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NRE7CH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PK2PPV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJF1YN' => 'arhy', 'AT1G24140' => 'ath', 'AT1G59970' => 'ath', 'AT1G70170' => 'ath', 'AT2G45040' => 'ath', 'AT4G16640' => 'ath', 'ATR0317G051' => 'atr', 'ATR0712G011' => 'atr', 'Atru.chr10.1004' => 'acertr', 'Atru.chr10.1179' => 'acertr', 'Atru.chr10.1560' => 'acertr', 'Atru.chr10.984' => 'acertr', 'Atru.chr10.993' => 'acertr', 'Atru.chr10.998' => 'acertr', 'Atru.chr11.1942' => 'acertr', 'Atru.chr11.1943' => 'acertr', 'Atru.chr11.1945' => 'acertr', 'Atru.chr12.936' => 'acertr', 'Atru.chr12.937' => 'acertr', 'Atru.chr12.938' => 'acertr', 'Atru.chr12.942' => 'acertr', 'Atru.chr12.943' => 'acertr', 'Atru.chr5.212' => 'acertr', 'Atru.chr8.1622' => 'acertr', 'Atru.chr8.2600' => 'acertr', 'Atru.chr9.1303' => 'acertr', 'AUR62004147' => 'cqu', 'AUR62007090' => 'cqu', 'AUR62013708' => 'cqu', 'AUR62019953' => 'cqu', 'AUR62026551' => 'cqu', 'AUR62026552' => 'cqu', 'AUR62026554' => 'cqu', 'AUR62039430' => 'cqu', 'AUR62039431' => 'cqu', 'BcaB02g08960' => 'bca', 'BcaB03g14795' => 'bca', 'BcaB03g15531' => 'bca', 'BcaB07g31192' => 'bca', 'BcaB07g32413' => 'bca', 'BcaC04g22202' => 'bca', 'BcaC05g26313' => 'bca', 'BcaC06g33502' => 'bca', 'BcaC08g45839' => 'bca', 'BcaC08g46467' => 'bca', 'BcaC09g50394' => 'bca', 'BcaNung00165' => 'bca', 'BcaNung02857' => 'bca', 'BolC1t02545H' => 'bol', 'BolC4t22229H' => 'bol', 'BolC5t31026H' => 'bol', 'BolC6t38747H' => 'bol', 'BolC6t39479H' => 'bol', 'BolC7t45334H' => 'bol', 'BolC9t55131H' => 'bol', 'BraA01t01994Z' => 'bra', 'BraA03t14100Z' => 'bra', 'BraA05t19487Z' => 'bra', 'BraA07t30754Z' => 'bra', 'BraA07t31234Z' => 'bra', 'BraA09t37414Z' => 'bra', 'BraA09t39569Z' => 'bra', 'C01p26000' => 'bna', 'C04p05980' => 'bna', 'C05p23260' => 'bna', 'C06p36260' => 'bna', 'C06p44060' => 'bna', 'C07p48120' => 'bna', 'C09p22160' => 'bna', 'CAN.G1058.39' => 'can', 'CAN.G159.13' => 'can', 'CAN.G21.23' => 'can', 'CAN.G412.1' => 'can', 'CAN.G58.25' => 'can', 'CANSAT01G0382' => 'cansat', 'CANSAT21G0718' => 'cansat', 'CANSAT21G1276' => 'cansat', 'CANSAT56G1405' => 'cansat', 'CARHR024410' => 'chi', 'CARHR024430' => 'chi', 'CARHR053070' => 'chi', 'CARHR140290' => 'chi', 'CARHR223140' => 'chi', 'Carub.0001s2358' => 'cru', 'Carub.0002s0531' => 'cru', 'Carub.0002s1686' => 'cru', 'Carub.0004s2763' => 'cru', 'Carub.0007s2476' => 'cru', 'Ca_22807_v3' => 'car', 'Ca_23119_v3' => 'car', 'Ca_24580_v3' => 'car', 'Ca_27080_v3' => 'car', 'Ca_27509_v3' => 'car', 'Ca_27510_v3' => 'car', 'CBR_g28681' => 'cbr', 'CBR_g51203' => 'cbr', 'Cc02_g24560' => 'ccan', 'Cc08_g12330' => 'ccan', 'Cc11_g14130' => 'ccan', 'CDE02G1719' => 'cde', 'CDE04G0229' => 'cde', 'CDE04G2578' => 'cde', 'CDE04G3250' => 'cde', 'CDE05G0233' => 'cde', 'CDE05G0425' => 'cde', 'CDE05G0543' => 'cde', 'CDE05G0557' => 'cde', 'CDE05G1230' => 'cde', 'CDE05G2029' => 'cde', 'CDE07G1253' => 'cde', 'CDE10G0057' => 'cde', 'CDE10G0264' => 'cde', 'CDE10G0953' => 'cde', 'CDE10G0987' => 'cde', 'CDE11G0500' => 'cde', 'Cfa001999' => 'cfa', 'Cfa002000' => 'cfa', 'Cfa002001' => 'cfa', 'Cfa002002' => 'cfa', 'Cfa011132' => 'cfa', 'Cfa014728' => 'cfa', 'Cfa014729' => 'cfa', 'Cfa014730' => 'cfa', 'Cfa014733' => 'cfa', 'Cfa014734' => 'cfa', 'Cfa014736' => 'cfa', 'Cfa014737' => 'cfa', 'Cfa014738' => 'cfa', 'Cfa014739' => 'cfa', 'Cfa014740' => 'cfa', 'Cfa018975' => 'cfa', 'Cfa018976' => 'cfa', 'Cfa019534' => 'cfa', 'Cfa019536' => 'cfa', 'Ciclev10012543m.g' => 'ccl', 'Ciclev10013342m.g' => 'ccl', 'Ciclev10013597m.g' => 'ccl', 'Ciclev10017519m.g' => 'ccl', 'Ciclev10017926m.g' => 'ccl', 'Ciclev10023711m.g' => 'ccl', 'Ciclev10024210m.g' => 'ccl', 'Ciclev10031870m.g' => 'ccl', 'CiPaw.01G181600' => 'cil', 'CiPaw.02G109500' => 'cil', 'CiPaw.02G109600' => 'cil', 'CiPaw.02G109700' => 'cil', 'CiPaw.02G109800' => 'cil', 'CiPaw.02G109900' => 'cil', 'CiPaw.02G110000' => 'cil', 'CiPaw.02G110100' => 'cil', 'CiPaw.02G110200' => 'cil', 'CiPaw.03G084700' => 'cil', 'CiPaw.03G084800' => 'cil', 'CiPaw.06G075900' => 'cil', 'CiPaw.11G079900' => 'cil', 'CiPaw.12G051700' => 'cil', 'CiPaw.13G030700' => 'cil', 'ClCG00G001720' => 'cla', 'ClCG00G005850' => 'cla', 'ClCG01G004090' => 'cla', 'ClCG01G012650' => 'cla', 'ClCG03G010490' => 'cla', 'ClCG05G000280' => 'cla', 'ClCG09G018600' => 'cla', 'ClCG09G018610' => 'cla', 'ClCG09G018620' => 'cla', 'ClCG09G022150' => 'cla', 'COL.COLO4_08130' => 'col', 'COL.COLO4_08131' => 'col', 'COL.COLO4_09869' => 'col', 'COL.COLO4_10224' => 'col', 'COL.COLO4_10228' => 'col', 'COL.COLO4_12463' => 'col', 'COL.COLO4_19787' => 'col', 'COL.COLO4_19788' => 'col', 'COL.COLO4_19789' => 'col', 'COL.COLO4_20660' => 'col', 'COL.COLO4_20789' => 'col', 'COL.COLO4_34361' => 'col', 'COL.COLO4_36461' => 'col', 'COL.COLO4_37165' => 'col', 'COL.COLO4_37882' => 'col', 'COL.COLO4_38485' => 'col', 'Cpa.g.sc29.169' => 'cpa', 'Cpa.g.sc5.334' => 'cpa', 'Cre14.g609202' => 'cre', 'CsaV3_1G044380' => 'csa', 'CsaV3_1G044400' => 'csa', 'CsaV3_3G007430' => 'csa', 'CsaV3_5G004260' => 'csa', 'CsaV3_5G025440' => 'csa', 'CsaV3_5G026980' => 'csa', 'CsaV3_5G037500' => 'csa', 'CsaV3_5G037510' => 'csa', 'CsaV3_5G037520' => 'csa', 'CsaV3_5G037530' => 'csa', 'CsaV3_5G037540' => 'csa', 'CsaV3_5G037550' => 'csa', 'CsaV3_5G037560' => 'csa', 'CsaV3_5G037570' => 'csa', 'CsaV3_5G037580' => 'csa', 'CsaV3_5G037590' => 'csa', 'CsaV3_5G037600' => 'csa', 'CsaV3_5G037610' => 'csa', 'CsaV3_5G037630' => 'csa', 'CsaV3_5G037640' => 'csa', 'CSS0010027' => 'camsi', 'CSS0025088' => 'camsi', 'CSS0026913' => 'camsi', 'CSS0027682' => 'camsi', 'CSS0027689' => 'camsi', 'CSS0027942' => 'camsi', 'CSS0031488' => 'camsi', 'CSS0032899' => 'camsi', 'DCAR_002007' => 'dca', 'DCAR_004961' => 'dca', 'DCAR_006708' => 'dca', 'DCAR_006709' => 'dca', 'DCAR_006711' => 'dca', 'DCAR_011487' => 'dca', 'DCAR_013963' => 'dca', 'DCAR_013964' => 'dca', 'DCAR_025089' => 'dca', 'DCAR_026562' => 'dca', 'DCAR_030383' => 'dca', 'DCAR_030385' => 'dca', 'DCAR_030386' => 'dca', 'DCAR_030387' => 'dca', 'DCAR_031081' => 'dca', 'Dinv24913' => 'din', 'Dinv29552' => 'din', 'Dinv31120' => 'din', 'Dinv35013' => 'din', 'Dinv35014' => 'din', 'Dinv35015' => 'din', 'Dinv35016' => 'din', 'Dinv39153' => 'din', 'Dinv43654' => 'din', 'Dinv44106' => 'din', 'Duzib084G0994' => 'dzi', 'Duzib114G0537' => 'dzi', 'Duzib114G0794' => 'dzi', 'Duzib133G0851' => 'dzi', 'Duzib147G0080' => 'dzi', 'Duzib147G0356' => 'dzi', 'Duzib147G1013' => 'dzi', 'Duzib187G0524' => 'dzi', 'Duzib205G1700' => 'dzi', 'Duzib251G0396' => 'dzi', 'Duzib264G1315' => 'dzi', 'Duzib268G1852' => 'dzi', 'ECA232G4099' => 'eca', 'ECA233G1318' => 'eca', 'ECA238G3730' => 'eca', 'ECA240G2271' => 'eca', 'ECA240G2386' => 'eca', 'ECA240G2734' => 'eca', 'ECA247G0177' => 'eca', 'ECA247G1487' => 'eca', 'ECA247G3000' => 'eca', 'ECA247G3902' => 'eca', 'ECA247G3937' => 'eca', 'EL10Ac1g00816' => 'bvu', 'EL10Ac6g13744' => 'bvu', 'EL10Ac6g13745' => 'bvu', 'EL10Ac6g13746' => 'bvu', 'Eucgr.B02562' => 'egr', 'Eucgr.D02088' => 'egr', 'Eucgr.D02504' => 'egr', 'Eucgr.I01878' => 'egr', 'Eucgr.K02792' => 'egr', 'Eucgr.K02793' => 'egr', 'Eucgr.K02794' => 'egr', 'Eucgr.K02795' => 'egr', 'Eucgr.K02797' => 'egr', 'FAN01G2596' => 'fan', 'FAN02G3355' => 'fan', 'FAN02G4315' => 'fan', 'FAN03G1136' => 'fan', 'FAN04G2296' => 'fan', 'FAN05G3408' => 'fan', 'FAN05G4603' => 'fan', 'FAN05G5015' => 'fan', 'FAN06G0945' => 'fan', 'FAN06G4422' => 'fan', 'FAN07G1343' => 'fan', 'FAN07G2497' => 'fan', 'FAN08G3531' => 'fan', 'FAN09G1472' => 'fan', 'FAN09G4570' => 'fan', 'FAN10G1594' => 'fan', 'FAN10G3698' => 'fan', 'FAN12G3189' => 'fan', 'FAN12G3928' => 'fan', 'FAN13G0097' => 'fan', 'FAN14G1890' => 'fan', 'FAN17G0960' => 'fan', 'FAN17G1978' => 'fan', 'FAN17G2703' => 'fan', 'FAN18G1291' => 'fan', 'FAN18G3934' => 'fan', 'FAN19G0152' => 'fan', 'FAN22G0541' => 'fan', 'FAN22G2036' => 'fan', 'FAN27G2001' => 'fan', 'FvH4_1g19280' => 'fve', 'FvH4_2g07981' => 'fve', 'FvH4_4g07510' => 'fve', 'FvH4_4g35170' => 'fve', 'FvH4_4g35180' => 'fve', 'FvH4_5g19070' => 'fve', 'FvH4_6g49970' => 'fve', 'FvH4_6g49990' => 'fve', 'FvH4_6g50000' => 'fve', 'FvH4_6g50010' => 'fve', 'FvH4_7g10690' => 'fve', 'Glyma.01G036900' => 'gma', 'Glyma.01G037000' => 'gma', 'Glyma.01G037100' => 'gma', 'Glyma.01G037200' => 'gma', 'Glyma.01G208800' => 'gma', 'Glyma.02G027800' => 'gma', 'Glyma.02G027900' => 'gma', 'Glyma.02G028000' => 'gma', 'Glyma.02G028051' => 'gma', 'Glyma.02G028100' => 'gma', 'Glyma.02G028200' => 'gma', 'Glyma.02G028300' => 'gma', 'Glyma.02G028500' => 'gma', 'Glyma.02G028600' => 'gma', 'Glyma.02G028700' => 'gma', 'Glyma.02G028800' => 'gma', 'Glyma.02G028900' => 'gma', 'Glyma.02G215700' => 'gma', 'Glyma.03G117700' => 'gma', 'Glyma.07G109400' => 'gma', 'Glyma.08G292300' => 'gma', 'Glyma.09G065900' => 'gma', 'Glyma.11G033400' => 'gma', 'Glyma.18G131300' => 'gma', 'Glyma.19G014200' => 'gma', 'Glyma.19G014300' => 'gma', 'Glyma.19G014400' => 'gma', 'Glyma.19G014500' => 'gma', 'Gohir.A05G319300' => 'ghi', 'Gohir.A10G199700' => 'ghi', 'Gohir.A11G026800' => 'ghi', 'Gohir.A11G068200' => 'ghi', 'Gohir.A11G077900' => 'ghi', 'Gohir.A12G051350' => 'ghi', 'Gohir.A12G216500' => 'ghi', 'Gohir.A12G216600' => 'ghi', 'Gohir.D05G321500' => 'ghi', 'Gohir.D07G224500' => 'ghi', 'Gohir.D10G207700' => 'ghi', 'Gohir.D11G026100' => 'ghi', 'Gohir.D11G072000' => 'ghi', 'Gohir.D11G072800' => 'ghi', 'Gohir.D11G082300' => 'ghi', 'Gohir.D12G049600' => 'ghi', 'Gohir.D12G219100' => 'ghi', 'Gohir.D12G219200' => 'ghi', 'Gohir.D12G219250' => 'ghi', 'Gorai.001G258900' => 'gra', 'Gorai.007G028300' => 'gra', 'Gorai.007G077400' => 'gra', 'Gorai.007G077600' => 'gra', 'Gorai.007G088000' => 'gra', 'Gorai.008G052600' => 'gra', 'Gorai.008G234700' => 'gra', 'Gorai.008G234800' => 'gra', 'Gorai.008G234900' => 'gra', 'Gorai.009G345000' => 'gra', 'Gorai.011G233400' => 'gra', 'GSVIVG01018206001' => 'vvi', 'GSVIVG01020151001' => 'vvi', 'GSVIVG01024144001' => 'vvi', 'GSVIVG01032545001' => 'vvi', 'GSVIVG01032546001' => 'vvi', 'GSVIVG01032548001' => 'vvi', 'GSVIVG01032549001' => 'vvi', 'HanXRQChr02g0044761' => 'han', 'HanXRQChr03g0087781' => 'han', 'HanXRQChr03g0089941' => 'han', 'HanXRQChr03g0092901' => 'han', 'HanXRQChr08g0227811' => 'han', 'HanXRQChr08g0229701' => 'han', 'HanXRQChr09g0245491' => 'han', 'HanXRQChr09g0251981' => 'han', 'HanXRQChr09g0251991' => 'han', 'HanXRQChr09g0265401' => 'han', 'HanXRQChr09g0265411' => 'han', 'HanXRQChr09g0265781' => 'han', 'HanXRQChr09g0265801' => 'han', 'HanXRQChr09g0265811' => 'han', 'HanXRQChr12g0382491' => 'han', 'HanXRQChr12g0384581' => 'han', 'HanXRQChr13g0404041' => 'han', 'HanXRQChr13g0419141' => 'han', 'HanXRQChr13g0422851' => 'han', 'HanXRQChr13g0423451' => 'han', 'HanXRQChr13g0423611' => 'han', 'HanXRQChr13g0423631' => 'han', 'HanXRQChr13g0423651' => 'han', 'HanXRQChr13g0423751' => 'han', 'HanXRQChr16g0510731' => 'han', 'HanXRQChr17g0570141' => 'han', 'Haze_02731' => 'cav', 'Haze_07362' => 'cav', 'Haze_07905' => 'cav', 'Haze_11411' => 'cav', 'Haze_11413' => 'cav', 'Haze_11414' => 'cav', 'Haze_11415' => 'cav', 'Haze_12126' => 'cav', 'Haze_26938' => 'cav', 'Hma1.2p1_0112F.1_g054260' => 'hma', 'Hma1.2p1_0112F.1_g054270' => 'hma', 'Hma1.2p1_0112F.1_g054273' => 'hma', 'Hma1.2p1_0112F.1_g054380' => 'hma', 'Hma1.2p1_0160F.1_g070550' => 'hma', 'Hma1.2p1_0316F.1_g123040' => 'hma', 'Hma1.2p1_0375F.1_g138980' => 'hma', 'Hma1.2p1_0375F.1_g138990' => 'hma', 'Hma1.2p1_0538F.1_g174420' => 'hma', 'Hma1.2p1_0697F.1_g205100' => 'hma', 'Hma1.2p1_0849F.1_g228130' => 'hma', 'Hma1.2p1_1172F.1_g263690' => 'hma', 'Hma1.2p1_1611F.1_g293510' => 'hma', 'HPP92_014492' => 'vpl', 'HPP92_017341' => 'vpl', 'HPP92_017353' => 'vpl', 'Hund25311' => 'sun', 'Hund25312' => 'sun', 'Lalb_Chr05g0214421' => 'lal', 'Lalb_Chr05g0217261' => 'lal', 'Lalb_Chr07g0195681' => 'lal', 'Lalb_Chr09g0326541' => 'lal', 'Lj2A218T57' => 'lonja', 'Lj2g0000827' => 'lja', 'Lj2g0003722' => 'lja', 'Lj2g0006574' => 'lja', 'Lj2g0007154' => 'lja', 'Lj2g0011690' => 'lja', 'Lj2g0012859' => 'lja', 'Lj2g0014593' => 'lja', 'Lj2g0015180' => 'lja', 'Lj2g0021621' => 'lja', 'Lj2g0027894' => 'lja', 'Lj2P218T25' => 'lonja', 'Lj3A499G9' => 'lonja', 'Lj3C499G1' => 'lonja', 'Lj3g0011885' => 'lja', 'Lj3g0025266' => 'lja', 'Lj3P521T26' => 'lonja', 'Lj3P522T22' => 'lonja', 'Lj6P799T41' => 'lonja', 'Lj8A263T42' => 'lonja', 'Lj9C562T9' => 'lonja', 'LjContig00170g0001940' => 'lja', 'LjContig00170g0009972' => 'lja', 'Lju41A29G30' => 'lonja', 'Lju41A29T31' => 'lonja', 'Lju41A30G56' => 'lonja', 'Lju41C29T7' => 'lonja', 'Lju41C29T9' => 'lonja', 'Lju41C30T9' => 'lonja', 'Lsat_1_v5_gn_3_125141' => 'lsa', 'Lsat_1_v5_gn_3_125261' => 'lsa', 'Lsat_1_v5_gn_3_125341' => 'lsa', 'Lsat_1_v5_gn_3_125760' => 'lsa', 'Lsat_1_v5_gn_3_125940' => 'lsa', 'Lsat_1_v5_gn_3_128240' => 'lsa', 'Lsat_1_v5_gn_4_6101' => 'lsa', 'Lsat_1_v5_gn_5_73220' => 'lsa', 'Lsat_1_v5_gn_5_73240' => 'lsa', 'Lsat_1_v5_gn_5_73280' => 'lsa', 'Lsat_1_v5_gn_6_17901' => 'lsa', 'Lsat_1_v5_gn_6_90820' => 'lsa', 'Lsat_1_v5_gn_9_112280' => 'lsa', 'Manes.01G195600' => 'mes', 'Manes.02G040400' => 'mes', 'Manes.05G050700' => 'mes', 'Manes.07G072600' => 'mes', 'Manes.07G074115' => 'mes', 'Manes.07G092600' => 'mes', 'Manes.07G092700' => 'mes', 'Manes.07G092800' => 'mes', 'Manes.07G092900' => 'mes', 'Manes.15G175568' => 'mes', 'Manes.15G175652' => 'mes', 'Manes.15G176072' => 'mes', 'Manes.15G176264' => 'mes', 'Manes.15G178200' => 'mes', 'Manes.15G178236' => 'mes', 'Manes.17G119514' => 'mes', 'Manes.17G119571' => 'mes', 'Manes.17G119628' => 'mes', 'Manes.17G119685' => 'mes', 'Manes.17G119742' => 'mes', 'Manes.17G119800' => 'mes', 'Mapoly0006s0257' => 'mpo', 'MBI04_g09514_MAGBIO' => 'mbi', 'MBI15_g00961_MAGBIO' => 'mbi', 'MBI17_g04592_MAGBIO' => 'mbi', 'MBI17_g09878_MAGBIO' => 'mbi', 'MBI17_g09879_MAGBIO' => 'mbi', 'MBI17_g39801_MAGBIO' => 'mbi', 'MBI17_g39802_MAGBIO' => 'mbi', 'MBI17_g39803_MAGBIO' => 'mbi', 'MD00G1063700' => 'mdo', 'MD01G1098700' => 'mdo', 'MD04G1045600' => 'mdo', 'MD04G1063000' => 'mdo', 'MD06G1057300' => 'mdo', 'MD07G1165400' => 'mdo', 'MD09G1040300' => 'mdo', 'MD09G1040400' => 'mdo', 'MD09G1040500' => 'mdo', 'MD09G1072500' => 'mdo', 'MD13G1085700' => 'mdo', 'MD16G1085000' => 'mdo', 'MD17G1040900' => 'mdo', 'Medtr2g079050' => 'mtr', 'Medtr5g012680' => 'mtr', 'Medtr5g036080' => 'mtr', 'Medtr5g036083' => 'mtr', 'Medtr5g036087' => 'mtr', 'Medtr5g036093' => 'mtr', 'Medtr5g036270' => 'mtr', 'Medtr5g036290' => 'mtr', 'Medtr5g036310' => 'mtr', 'Medtr5g036360' => 'mtr', 'Medtr5g036365' => 'mtr', 'Medtr5g036410' => 'mtr', 'Medtr6g008480' => 'mtr', 'Medtr8g005900' => 'mtr', 'Medtr8g062770' => 'mtr', 'MELO3C002936.2' => 'cme', 'MELO3C005528.2' => 'cme', 'MELO3C005965.2' => 'cme', 'MELO3C010038.2' => 'cme', 'MELO3C010040.2' => 'cme', 'MELO3C021492.2' => 'cme', 'MELO3C021493.2' => 'cme', 'MELO3C021495.2' => 'cme', 'MELO3C021496.2' => 'cme', 'MELO3C021497.2' => 'cme', 'MELO3C021498.2' => 'cme', 'MELO3C021501.2' => 'cme', 'MELO3C021504.2' => 'cme', 'MELO3C021506.2' => 'cme', 'MELO3C021507.2' => 'cme', 'MELO3C021509.2' => 'cme', 'MELO3C033549.2' => 'cme', 'Migut.A01108' => 'egut', 'Migut.B01574' => 'egut', 'Migut.D00636' => 'egut', 'Migut.D00637' => 'egut', 'Migut.D00638' => 'egut', 'Migut.D00639' => 'egut', 'Migut.D01911' => 'egut', 'Migut.D01912' => 'egut', 'Migut.D01915' => 'egut', 'Migut.D01916' => 'egut', 'Migut.E00135' => 'egut', 'Migut.I00055' => 'egut', 'Migut.J01238' => 'egut', 'Migut.K01350' => 'egut', 'Migut.K01351' => 'egut', 'Migut.K01352' => 'egut', 'Migut.K01353' => 'egut', 'Migut.K01354' => 'egut', 'Migut.L00286' => 'egut', 'Migut.L00287' => 'egut', 'Migut.L00288' => 'egut', 'Migut.L00289' => 'egut', 'Migut.L00563' => 'egut', 'Migut.L00564' => 'egut', 'Migut.L00887' => 'egut', 'Migut.L01389' => 'egut', 'Migut.N02333' => 'egut', 'Migut.N02351' => 'egut', 'Migut.O00738' => 'egut', 'MSTRG.12105' => 'ama', 'MSTRG.15498' => 'ama', 'MSTRG.17151' => 'ama', 'MSTRG.25520' => 'ama', 'MSTRG.633' => 'ama', 'MSTRG.7861' => 'ama', 'Nitab4.5_0000034g0100' => 'nta', 'Nitab4.5_0000034g0110' => 'nta', 'Nitab4.5_0000257g0040' => 'nta', 'Nitab4.5_0000882g0010' => 'nta', 'Nitab4.5_0002059g0010' => 'nta', 'Nitab4.5_0003786g0020' => 'nta', 'Nitab4.5_0004856g0010' => 'nta', 'Nitab4.5_0006258g0040' => 'nta', 'Nitab4.5_0011364g0010' => 'nta', 'Nn1g00970' => 'nnu', 'Nn3g17024' => 'nnu', 'Nn3g17025' => 'nnu', 'Nn3g17026' => 'nnu', 'Nn3g17027' => 'nnu', 'Nn3g19237' => 'nnu', 'Nn4g22921' => 'nnu', 'Nn7g36517' => 'nnu', 'Nn8g39941' => 'nnu', 'Oeu002333.1' => 'oeu', 'Oeu011511.1' => 'oeu', 'Oeu017595.1' => 'oeu', 'Oeu019835.1' => 'oeu', 'Oeu029211.1' => 'oeu', 'Oeu032411.1' => 'oeu', 'Oeu032412.1' => 'oeu', 'Oeu034135.1' => 'oeu', 'Oeu039495.1' => 'oeu', 'Oeu040206.1' => 'oeu', 'Oeu050235.1' => 'oeu', 'Oeu061007.1' => 'oeu', 'Oeu063206.1' => 'oeu', 'Os02g0740700' => 'osa', 'Os06g0239100' => 'osa', 'Os10g0557900' => 'osa', 'Os10g0558100' => 'osa', 'Os10g0558125' => 'osa', 'Peaxi162Scf00001g10525' => 'pax', 'Peaxi162Scf00134g00172' => 'pax', 'Peaxi162Scf00174g00045' => 'pax', 'Peaxi162Scf00174g00054' => 'pax', 'Peaxi162Scf01141g00008' => 'pax', 'PGR004G1675' => 'pgr', 'PGR031G1906' => 'pgr', 'PGR042G0855' => 'pgr', 'PGR042G2857' => 'pgr', 'PGR042G3184' => 'pgr', 'PGR044G1730' => 'pgr', 'PGR044G2097' => 'pgr', 'PGR044G2211' => 'pgr', 'PGR044G2677' => 'pgr', 'PGR083G2756' => 'pgr', 'PGR119G0490' => 'pgr', 'PGR142G2117' => 'pgr', 'PGR142G3209' => 'pgr', 'PGSC0003DMG400001923' => 'stu', 'PGSC0003DMG400001924' => 'stu', 'PGSC0003DMG400004818' => 'stu', 'PGSC0003DMG400029236' => 'stu', 'PGSC0003DMG400037202' => 'stu', 'PGSC0003DMG400041373' => 'stu', 'PGSC0003DMG400046023' => 'stu', 'PGSC0003DMG400046081' => 'stu', 'PGSC0003DMG400046359' => 'stu', 'Phvul.002G058000' => 'pvu', 'Phvul.002G076400' => 'pvu', 'Phvul.002G076500' => 'pvu', 'Phvul.002G076600' => 'pvu', 'Phvul.002G076700' => 'pvu', 'Phvul.003G055800' => 'pvu', 'Phvul.004G021000' => 'pvu', 'Phvul.009G192900' => 'pvu', 'Phvul.010G056300' => 'pvu', 'Potri.001G157500' => 'ptr', 'Potri.003G077400' => 'ptr', 'Potri.008G027500' => 'ptr', 'Potri.008G027600' => 'ptr', 'Potri.008G027700' => 'ptr', 'Potri.008G027900' => 'ptr', 'Potri.008G027975' => 'ptr', 'Potri.012G104600' => 'ptr', 'Potri.013G033200' => 'ptr', 'Potri.013G100400' => 'ptr', 'Potri.014G058200' => 'ptr', 'Potri.015G103900' => 'ptr', 'Potri.019G073400' => 'ptr', 'Potri.019G073700' => 'ptr', 'Potri.019G073800' => 'ptr', 'Pp3c6_6760' => 'ppa', 'Pp3c8_14810' => 'ppa', 'Prupe.1G198800' => 'ppe', 'Prupe.1G261000' => 'ppe', 'Prupe.2G135100' => 'ppe', 'Prupe.2G204200' => 'ppe', 'Prupe.2G204300' => 'ppe', 'Prupe.2G204500' => 'ppe', 'Prupe.3G250900' => 'ppe', 'Prupe.3G277300' => 'ppe', 'Prupe.3G277400' => 'ppe', 'Prupe.3G277500' => 'ppe', 'Prupe.3G277600' => 'ppe', 'Prupe.3G277700' => 'ppe', 'Prupe.3G277800' => 'ppe', 'Prupe.3G277900' => 'ppe', 'Prupe.3G278000' => 'ppe', 'Prupe.3G278100' => 'ppe', 'Prupe.5G068200' => 'ppe', 'Psat1g079720' => 'psa', 'Psat2g112760' => 'psa', 'Psat2g112800' => 'psa', 'Psat2g113320' => 'psa', 'Psat2g113360' => 'psa', 'Psat2g177840' => 'psa', 'Psat4g128200' => 'psa', 'Psat4g209040' => 'psa', 'PSO013G0002' => 'pso', 'PSO017G2341' => 'pso', 'PSO017G5037' => 'pso', 'PSO040G0018' => 'pso', 'PSO040G0024' => 'pso', 'PSO063G2495' => 'pso', 'PSO063G5067' => 'pso', 'PSO135G0059' => 'pso', 'PSO135G0516' => 'pso', 'PSO170G2276' => 'pso', 'PSO170G3396' => 'pso', 'PSO210G3434' => 'pso', 'PSO210G4611' => 'pso', 'PSO339G5455' => 'pso', 'PSO349G0265' => 'pso', 'PSO357G0165' => 'pso', 'PSO357G0508' => 'pso', 'PSO423G0025' => 'pso', 'PSO423G0080' => 'pso', 'PSO423G0203' => 'pso', 'PSO423G0241' => 'pso', 'PSO455G0094' => 'pso', 'PSO513G0208' => 'pso', 'PSO541G2614' => 'pso', 'PSO541G5907' => 'pso', 'PSO541G6229' => 'pso', 'PSO591G0167' => 'pso', 'PSO591G0393' => 'pso', 'PSO596G0037' => 'pso', 'PSO673G0025' => 'pso', 'PSO675G1412' => 'pso', 'PSO732G0801' => 'pso', 'PSO732G0809' => 'pso', 'PSO761G0422' => 'pso', 'PSO761G0511' => 'pso', 'PSO781G0118' => 'pso', 'PSO781G0129' => 'pso', 'PSO781G0249' => 'pso', 'PSO782G0569' => 'pso', 'PSO782G3155' => 'pso', 'PSO782G3659' => 'pso', 'PSO832G0469' => 'pso', 'PSO832G0933' => 'pso', 'PSO832G1993' => 'pso', 'PSO832G2508' => 'pso', 'QL02p066340' => 'qlo', 'QL02p066365' => 'qlo', 'QL02p066387' => 'qlo', 'QL02p066443' => 'qlo', 'QL03p067171' => 'qlo', 'QL03p067186' => 'qlo', 'QL04p035668' => 'qlo', 'QL06p018761' => 'qlo', 'QL06p018786' => 'qlo', 'QL06p018857' => 'qlo', 'QL06p018871' => 'qlo', 'QL06p018898' => 'qlo', 'QL06p018945' => 'qlo', 'QL06p019035' => 'qlo', 'QL06p019074' => 'qlo', 'QL06p019147' => 'qlo', 'QL06p019179' => 'qlo', 'QL10p015899' => 'qlo', 'QL10p015926' => 'qlo', 'QL10p015940' => 'qlo', 'QL12p011993' => 'qlo', 'QL93p0146_0001' => 'qlo', 'QL93p0146_0014' => 'qlo', 'RcHm_v2.0_Chr1g0348631' => 'rch', 'RcHm_v2.0_Chr2g0134151' => 'rch', 'RcHm_v2.0_Chr2g0170151' => 'rch', 'RcHm_v2.0_Chr2g0170161' => 'rch', 'RcHm_v2.0_Chr2g0170221' => 'rch', 'RcHm_v2.0_Chr2g0170241' => 'rch', 'RcHm_v2.0_Chr2g0170251' => 'rch', 'RcHm_v2.0_Chr2g0170261' => 'rch', 'RcHm_v2.0_Chr2g0171951' => 'rch', 'RcHm_v2.0_Chr4g0400091' => 'rch', 'RcHm_v2.0_Chr4g0444791' => 'rch', 'RcHm_v2.0_Chr6g0262451' => 'rch', 'RcHm_v2.0_Chr6g0262461' => 'rch', 'RcHm_v2.0_Chr7g0203521' => 'rch', 'RcHm_v2.0_Chr7g0222561' => 'rch', 'RcHm_v2.0_Chr7g0222571' => 'rch', 'Rhsim03G0134100' => 'rsi', 'Rhsim05G0046000' => 'rsi', 'Rhsim05G0204200' => 'rsi', 'Rhsim07G0032700' => 'rsi', 'Rhsim07G0109800' => 'rsi', 'Rhsim08G0055900' => 'rsi', 'Rhsim08G0057600' => 'rsi', 'Rhsim08G0057700' => 'rsi', 'Rhsim08G0057800' => 'rsi', 'Rhsim08G0057900' => 'rsi', 'Rhsim08G0058000' => 'rsi', 'Rhsim08G0058100' => 'rsi', 'Rhsim08G0058200' => 'rsi', 'Rhsim08G0058300' => 'rsi', 'Rhsim08G0058400' => 'rsi', 'Rhsim08G0058600' => 'rsi', 'Rhsim08G0058800' => 'rsi', 'Rhsim08G0059100' => 'rsi', 'Rhsim08G0059200' => 'rsi', 'Rhsim08G0059300' => 'rsi', 'Rhsim08G0059400' => 'rsi', 'Rhsim08G0059500' => 'rsi', 'Rhsim08G0059600' => 'rsi', 'Rhsim08G0059700' => 'rsi', 'Rhsim08G0059800' => 'rsi', 'Rhsim08G0059900' => 'rsi', 'Rhsim08G0060000' => 'rsi', 'Rhsim08G0060100' => 'rsi', 'Rhsim08G0060200' => 'rsi', 'Rhsim08G0060300' => 'rsi', 'Rhsim08G0060400' => 'rsi', 'Rhsim08G0060500' => 'rsi', 'Rhsim08G0060600' => 'rsi', 'Rhsim08G0060700' => 'rsi', 'Rhsim08G0060800' => 'rsi', 'Rhsim08G0060900' => 'rsi', 'Rhsim08G0061000' => 'rsi', 'Rhsim08G0062200' => 'rsi', 'Rhsim08G0062300' => 'rsi', 'Rhsim08G0097000' => 'rsi', 'Rhsim12G0125800' => 'rsi', 'RhsimUnG0140500' => 'rsi', 'Sabra01G0134000' => 'sbr', 'Sabra03G0047700' => 'sbr', 'Sabra08G0018800' => 'sbr', 'Sabra08G0018900' => 'sbr', 'Sabra08G0019000' => 'sbr', 'Sabra08G0019100' => 'sbr', 'Sabra12G0077000' => 'sbr', 'Sabra14G0042300' => 'sbr', 'Sabra15G0123700' => 'sbr', 'Sabra19G0084700' => 'sbr', 'Sabra19G0084800' => 'sbr', 'Sabra19G0084900' => 'sbr', 'SalBow1G1547' => 'sbo', 'SalBow2G0295' => 'sbo', 'SalBow2G2082' => 'sbo', 'SalBow5G3224' => 'sbo', 'SalBow5G3659' => 'sbo', 'SalBow5G4776' => 'sbo', 'SalBow6G1238' => 'sbo', 'SalBow6G1736' => 'sbo', 'SalBow6G3335' => 'sbo', 'SalBow8G0090' => 'sbo', 'SalBow8G1601' => 'sbo', 'SalBow8G1952' => 'sbo', 'SalBow8G2348' => 'sbo', 'SalBow8G4320' => 'sbo', 'SalBow8G4954' => 'sbo', 'SalBow8G5169' => 'sbo', 'SalBow8G5485' => 'sbo', 'Sc01g0008410' => 'sci', 'Sc04g0008810' => 'sci', 'Sed0002611' => 'sed', 'Sed0004217' => 'sed', 'Sed0004380' => 'sed', 'Sed0012239' => 'sed', 'Sed0014429' => 'sed', 'Sed0014787' => 'sed', 'Sed0016984' => 'sed', 'Sed0017339' => 'sed', 'Sed0017802' => 'sed', 'Sed0019195' => 'sed', 'Sed0023166' => 'sed', 'Sed0025687' => 'sed', 'Sed0026629' => 'sed', 'Sed0028162' => 'sed', 'SEGI_01554' => 'sgi', 'SEGI_13514' => 'sgi', 'SEGI_19108' => 'sgi', 'SEGI_22042' => 'sgi', 'SEGI_25057' => 'sgi', 'SEGI_28431' => 'sgi', 'SGA_v2.0_scaffold114G31853' => 'sas', 'SGA_v2.0_scaffold29G12184' => 'sas', 'SGA_v2.0_scaffold29G12187' => 'sas', 'SGA_v2.0_scaffold29G12287' => 'sas', 'SGA_v2.0_scaffold467G52029' => 'sas', 'SGA_v2.0_scaffold52G19191' => 'sas', 'SGA_v2.0_scaffold5312G54628' => 'sas', 'SGA_v2.0_scaffold5G02880' => 'sas', 'SGA_v2.0_scaffold87G26999' => 'sas', 'SGA_v2.0_scaffold8G04264' => 'sas', 'SMO116G0444' => 'smo', 'SMO203G0175' => 'smo', 'Solyc04g005040.1' => 'sly', 'Solyc04g005050.1' => 'sly', 'Solyc05g006360.2' => 'sly', 'Solyc08g078550.1' => 'sly', 'Solyc10g018750.1' => 'sly', 'Solyc10g018760.1' => 'sly', 'Sopen04g001060' => 'spe', 'Sopen04g001070' => 'spe', 'Sopen08g027030' => 'spe', 'Sopen10g008550' => 'spe', 'Sp1g21470' => 'spa', 'Sp2g04640' => 'spa', 'Sp4g27100' => 'spa', 'Sp5g25290' => 'spa', 'Sp7g15260' => 'spa', 'TAR274G0001' => 'tar', 'TAR274G0002' => 'tar', 'TAR371G0163' => 'tar', 'TAR371G0281' => 'tar', 'TAR371G0364' => 'tar', 'TAR371G0837' => 'tar', 'TAR499G0002' => 'tar', 'TAR622G0147' => 'tar', 'TAR622G0181' => 'tar', 'TAR622G0231' => 'tar', 'TAR622G0318' => 'tar', 'TAR622G0499' => 'tar', 'TAR622G0503' => 'tar', 'TAR622G0594' => 'tar', 'TAR622G0727' => 'tar', 'TAR622G0817' => 'tar', 'TAR629G2860' => 'tar', 'TAR629G3141' => 'tar', 'TAR636G1902' => 'tar', 'THA.LOC104802477' => 'tha', 'THA.LOC104812775' => 'tha', 'THA.LOC104822952' => 'tha', 'THA.LOC104823666' => 'tha', 'Thecc.01G386400' => 'tca', 'Thecc.02G010200' => 'tca', 'Thecc.02G240500' => 'tca', 'Thecc.03G250000' => 'tca', 'Thecc.04G139400' => 'tca', 'Thecc.04G139700' => 'tca', 'Thecc.09G225500' => 'tca', 'Thecc.09G225600' => 'tca', 'Thecc.10G094300' => 'tca', 'Thecc.10G112200' => 'tca', 'Thecc.10G112400' => 'tca', 'Thecc.10G112500' => 'tca', 'Thecc.10G112700' => 'tca', 'Thecc.10G154700' => 'tca', 'Thhalv10001525m.g' => 'esa', 'Thhalv10007920m.g' => 'esa', 'Thhalv10018701m.g' => 'esa', 'Thhalv10023823m.g' => 'esa', 'Thhalv10025551m.g' => 'esa', 'TPR.G17312' => 'tpr', 'TPR.G17321' => 'tpr', 'TPR.G17338' => 'tpr', 'TPR.G19406' => 'tpr', 'TPR.G23162' => 'tpr', 'TPR.G23168' => 'tpr', 'TPR.G25894' => 'tpr', 'TPR.G28727' => 'tpr', 'TPR.G31278' => 'tpr', 'TPR.G8744' => 'tpr', 'TWI18G1226' => 'twi', 'TWI23G1278' => 'twi', 'TWI38G0004' => 'twi', 'TWI56G0419' => 'twi', 'TWI56G0452' => 'twi', 'TWI56G0465' => 'twi', 'TWI56G0616' => 'twi', 'TWI56G0671' => 'twi', 'TWI56G0741' => 'twi', 'TWI56G0893' => 'twi', 'TWI56G1216' => 'twi', 'TWI56G1219' => 'twi', 'TWI56G1240' => 'twi', 'TWI56G1311' => 'twi', 'TWI56G1398' => 'twi', 'TWI60G1059' => 'twi', 'TWI63G1705' => 'twi', 'TWI75G0054' => 'twi', 'TWI75G1323' => 'twi', 'TWI75G1727' => 'twi', 'unitig_22.g6478' => 'ugi', 'unitig_26.g9723' => 'ugi', 'unitig_46.g18228' => 'ugi', 'unitig_748.g8438' => 'ugi', 'vmacro00197' => 'vma', 'vmacro03990' => 'vma', 'vmacro03991' => 'vma', 'vmacro06829' => 'vma', 'vmacro13461' => 'vma', 'vmacro14078' => 'vma', 'vmacro18225' => 'vma', 'vmacro18226' => 'vma', 'vmacro22657' => 'vma', 'VMungo0251G0998' => 'vmu', 'VMungo0331G1656' => 'vmu', 'VMungo0464G0002' => 'vmu', 'VMungo0464G1262' => 'vmu', 'VMungo0464G1779' => 'vmu', 'VMungo1127G1755' => 'vmu', 'VMungo1215G0085' => 'vmu', 'VMungo1215G0676' => 'vmu', 'VMungo1215G1010' => 'vmu', 'VMungo1215G1345' => 'vmu', 'VMungo1215G1999' => 'vmu', 'VMungo1215G2149' => 'vmu', 'VMungo1215G2842' => 'vmu', 'Zm00001eb023280' => 'zma', 'Zm00001eb254130' => 'zma', 'Zm00001eb371880' => 'zma' ) $gf_id = 'HOM05D000502' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000502' ) $data_identifier = 'HOM05D000502' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 14, 'aar' => (int) 6, 'aag' => (int) 1, 'ach' => (int) 10, 'amhyb' => (int) 2, 'aly' => (int) 7, 'aox' => (int) 12, 'arhy' => (int) 10, 'ath' => (int) 5, 'atr' => (int) 2, 'acertr' => (int) 18, 'cqu' => (int) 9, 'bca' => (int) 13, 'bol' => (int) 7, 'bra' => (int) 7, 'can' => (int) 5, 'cansat' => (int) 4, 'chi' => (int) 5, 'cru' => (int) 5, 'car' => (int) 6, 'cbr' => (int) 2, 'ccan' => (int) 3, 'cde' => (int) 16, 'cfa' => (int) 19, 'ccl' => (int) 8, 'cil' => (int) 15, 'cla' => (int) 10, 'col' => (int) 16, 'cpa' => (int) 2, 'cre' => (int) 1, 'csa' => (int) 20, 'camsi' => (int) 8, 'dca' => (int) 15, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 11, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 30, 'fve' => (int) 11, 'gma' => (int) 28, 'ghi' => (int) 19, 'gra' => (int) 11, 'vvi' => (int) 7, 'han' => (int) 26, 'cav' => (int) 9, 'hma' => (int) 13, 'vpl' => (int) 3, 'sun' => (int) 2, 'lal' => (int) 4, 'lonja' => (int) 15, 'lja' => (int) 14, 'lsa' => (int) 13, 'mes' => (int) 21, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 13, 'mtr' => (int) 15, 'cme' => (int) 17, 'egut' => (int) 29, 'ama' => (int) 6, 'nta' => (int) 9, 'nnu' => (int) 9, 'oeu' => (int) 13, 'osa' => (int) 5, 'pax' => (int) 5, 'pgr' => (int) 13, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 15, 'ppa' => (int) 2, 'ppe' => (int) 17, 'psa' => (int) 8, 'pso' => (int) 45, 'qlo' => (int) 23, 'rch' => (int) 16, 'rsi' => (int) 42, 'sbr' => (int) 12, 'sbo' => (int) 17, 'sci' => (int) 2, 'sed' => (int) 14, 'sgi' => (int) 6, 'sas' => (int) 10, 'smo' => (int) 2, 'sly' => (int) 6, 'spe' => (int) 4, 'spa' => (int) 5, 'tar' => (int) 19, 'tha' => (int) 4, 'tca' => (int) 14, 'esa' => (int) 5, 'tpr' => (int) 10, 'twi' => (int) 20, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 13, 'zma' => (int) 3 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb371880' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1